PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn300981
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 205aa    MW: 23194.9 Da    PI: 9.8365
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn300981genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM89.46.5e-282510251128
         NAM  51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 +++++++w+fF++r++++a+g r++r+t+sgyWkatg+   v+s++++++g+kkt+vfykg+ap g+kt+W mheyr+
  Achn300981  25 CRKDKEQWFFFAPRQEREAHGGRPSRTTTSGYWKATGSPGYVYSSENRVIGVKKTMVFYKGKAPAGRKTKWKMHEYRA 102
                 445678**********************************************************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100531.6241126IPR003441NAC domain
SuperFamilySSF1019414.84E-3119124IPR003441NAC domain
PfamPF023655.3E-1426101IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MFRNGYVADQ SQTWARAEQL CGKLCRKDKE QWFFFAPRQE REAHGGRPSR TTTSGYWKAT  60
GSPGYVYSSE NRVIGVKKTM VFYKGKAPAG RKTKWKMHEY RAIEQQAGCA VPKLRHELTL  120
CRVYVISGSF RAFDRRPTGA ETSDAVTEQR HGDQSNSQAN KTVEKTRSPE SSYSGEGHFE  180
PPQANTGMFS ALEPLWEWEQ LNLG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swp_D2e-242912473166NAC domain-containing protein 19
3swp_C2e-242912473166NAC domain-containing protein 19
3swp_B2e-242912473166NAC domain-containing protein 19
3swp_A2e-242912473166NAC domain-containing protein 19
3swm_D2e-242912473166NAC domain-containing protein 19
3swm_C2e-242912473166NAC domain-containing protein 19
3swm_B2e-242912473166NAC domain-containing protein 19
3swm_A2e-242912473166NAC domain-containing protein 19
4dul_B3e-242912470163NAC domain-containing protein 19
4dul_A3e-242912470163NAC domain-containing protein 19
1ut7_B3e-242912470163NO APICAL MERISTEM PROTEIN
1ut7_A3e-242912470163NO APICAL MERISTEM PROTEIN
1ut4_B3e-242912470163NO APICAL MERISTEM PROTEIN
1ut4_A3e-242912470163NO APICAL MERISTEM PROTEIN
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015872891.18e-78PREDICTED: NAC domain-containing protein 90-like
SwissprotQ9FMR33e-64NAC90_ARATH; NAC domain-containing protein 90
TrEMBLA0A0M4G3P65e-78A0A0M4G3P6_MANES; NAC transcription factors 36
STRINGPOPTR_0001s22630.19e-75(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24942357
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44350.24e-70NAC domain containing protein 61